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The Drexler-Smalley Debate on Molecular Assembly
 
 
Nanotechnology pioneer Eric Drexler and Rice University Professor and Nobelist Richard Smalley have engaged in a crucial debate on the feasibility of molecular assembly. Smalley's position, which denies both the promise and the peril of molecular assembly, will ultimately backfire and will fail to guide nanotechnology research in the needed constructive direction, says Ray Kurzweil. By the 2020s, molecular assembly will provide tools to effectively combat poverty, clean up our environment, overcome disease, extend human longevity, and many other worthwhile pursuits, he predicts.  
 
 
Published on Kurzweilai.net Dec. 1, 2003. 
Nanotechnology pioneer Eric Drexler and Rice University Professor 
              and Nobelist Richard Smalley have engaged in a crucial debate on 
              the feasibility of molecular assembly, which is the key to the most 
              revolutionary capabilities of nanotechnology.  Although Smalley 
              was originally inspired by Drexler's ground-breaking works and has 
              himself become a champion of contemporary research initiatives in 
              nanotechnology, he has also taken on the role of key critic of Drexler's 
              primary idea of precisely guided molecular manufacturing.   
 This debate has picked up intensity with today's publication 
              of several rounds of this dialogue between these two pioneers.  First 
              some background: 
Background: The Roots of Nanotechnology
            Nanotechnology promises the tools to rebuild the physical world, our 
            bodies and brains included, molecular fragment by molecular fragment, 
            potentially atom by atom.  We are shrinking the key feature size of 
            technology, in accordance with what I call the "law of accelerating 
            returns," at the exponential rate of approximately a factor of 4 per 
            linear dimension per decade.  At this rate, the key feature sizes 
            for most electronic and many mechanical technologies will be in the 
            nanotechnology range, generally considered to be under 100 nanometers, 
            by the 2020s (electronics has already dipped below this threshold, 
            albeit not yet in three-dimensional structures and not self-assembling).  
            Meanwhile, there has been rapid progress, particularly in the last 
            several years, in preparing the conceptual framework and design ideas 
            for the coming age of nanotechnology.  
            
            Most nanotechnology historians date the conceptual birth of nanotechnology 
            to physicist Richard Feynman's seminal speech in 1959, "There's Plenty 
            of Room at the Bottom," in which he described the profound implications 
            and the inevitability of engineering machines at the level of atoms: 
            
"The principles of physics, as far as I can see, do not speak against 
              the possibility of maneuvering things atom by atom.  It would be, 
              in principle, possible. . . .for a physicist to synthesize any chemical 
              substance that the chemist writes down. . .How?  Put the atoms down 
              where the chemist says, and so you make the substance.  The problems 
              of chemistry and biology can be greatly helped if our ability to 
              see what we are doing, and to do things on an atomic level, is ultimately 
              developed – a development which I think cannot be avoided." 
An even earlier conceptual root for nanotechnology was formulated 
              by the information theorist John Von Neumann in the early 1950s 
              with his model of a self-replicating system based on a universal 
              constructor combined with a universal computer.  In this proposal, 
              the computer runs a program that directs the constructor, which 
              in turn constructs a copy of both the computer (including its self-replication 
              program) and the constructor.  At this level of description, Von 
              Neumann's proposal is quite abstract -- the computer and constructor 
              could be made in a great variety of ways, as well as from diverse 
              materials, and could even be a theoretical mathematical construction.  
              He took the concept one step further and proposed a "kinematic constructor," 
              a robot with at least one manipulator (arm) that would build a replica 
              of itself from a "sea of parts" in its midst.   
It was left to Eric Drexler to found the modern field of nanotechnology, 
              with a draft of his seminal Ph.D. thesis in the mid 1980s, by essentially 
              combining these two intriguing suggestions.  Drexler described a 
              Von Neumann Kinematic Constructor, which for its "sea of parts" 
              used atoms and molecular fragments, as suggested in Feynman's speech.  
              Drexler's vision cut across many disciplinary boundaries, and was 
              so far reaching, that no one was daring enough to be his thesis 
              advisor, except for my own mentor, Marvin Minsky.  Drexler's doctoral 
              thesis (premiered in his book, Engines 
              of Creation in 1986 and articulated technically in his 1992 
              book Nanosystems) 
              laid out the foundation of nanotechnology and provided the road 
              map still being pursued today.   
Von Neumann's Universal Constructor, as applied to atoms and molecular 
              fragments, was now called a "universal assembler."  Drexler's assembler 
              was universal because it could essentially make almost anything 
              in the world.  A caveat is in order here.  The products of a universal 
              assembler necessarily have to follow the laws of physics and chemistry, 
              so only atomically stable structures would be viable.  Furthermore, 
              any specific assembler would be restricted to building products 
              from its sea of parts, although the feasibility of using individual 
              atoms has been repeatedly demonstrated.   
Although Drexler did not provide a detailed design of an assembler, 
              and such a design has still not been fully specified, his thesis 
              did provide extensive existence proofs for each of the principal 
              components of a universal assembler, which include the following 
              subsystems: 
-  The computer: to provide the intelligence to control 
                the assembly process.  As with all of the subsystems, the computer 
                needs to be small and simple.  Drexler described an intriguing 
                mechanical computer with molecular "locks" instead of transistor 
                gates.  Each lock required only 5 cubic nanometers of space and 
                could switch 20 billion times a second.  This proposal remains 
                more competitive than any known electronic technology, although 
                electronic computers built from three-dimensional arrays of carbon
nanotubes may be a suitable alternative.
 
 
 
-  The instruction architecture: Drexler and his colleague 
                Ralph Merkle have proposed a "SIMD" (Single Instruction Multiple 
                Data") architecture in which a single data store would record 
                the instructions and transmit them to trillions of molecular-sized 
                assemblers (each with their own simple computer) simultaneously.  
                Thus each assembler would not have to store the entire program 
                for creating the desired product.  This "broadcast" architecture 
                also addresses a key safety concern by shutting down the self-replication 
                process if it got out of control by terminating the centralized 
                source of the replication instructions.  However, as Drexler points 
                out[1], a nanoscale assembler 
                does not necessarily have to be self-replicating. Given the inherent 
                dangers in self-replication, the ethical standards proposed by 
                the Foresight Institute contain prohibitions against unrestricted 
                self-replication, especially in a natural environment.
 
 
 
-  Instruction transmission: transmission of the instructions 
                from the centralized data store to each of the many assemblers 
                would be accomplished electronically if the computer is electronic 
                or through mechanical vibrations if Drexler's concept of a mechanical 
                computer were used.  
 
 
 
-  The construction robot: the constructor would be a simple 
                molecular robot with a single arm, similar to Von Neumann's kinematic 
                constructor, but on a tiny scale.  The feasibility of building 
                molecular-based robot arms, gears, rotors, and motors has been 
                demonstrated in the years since Drexler's thesis, as I discuss 
                below.
 
 
 
-  The robot arm tip: Drexler's follow-up book in 1992, 
                Nanosystems: molecular machinery, manufacturing, and computation, 
                provided a number of feasible chemistries for the tip of the robot 
                arm that would be capable of grasping (using appropriate atomic 
                force fields) a molecular fragment, or even a single atom, and 
                then depositing it in a desired location.  We know from the chemical 
                vapor deposition process used to construct artificial diamonds 
                that it is feasible to remove individual carbon atoms, as well 
                as molecular fragments that include carbon, and then place them 
                in another location through precisely controlled chemical reactions 
                at the tip.  The process to build artificial diamond is a chaotic 
                process involving trillions of atoms, but the underlying process 
                has been harnessed to design a robot arm tip that can remove hydrogen 
                atoms from a source material and deposit it at desired location 
                in a molecular machine being constructed.  In this proposal, the 
                tiny machines are built out of a diamond-like (called "diamondoid") 
                material.  In addition to having great strength, the material 
                can be doped with impurities in a precise fashion to create electronic 
                components such as transistors.  Simulations have shown that gears, 
                levers, motors, and other mechanical systems can also be constructed 
                from these carbon arrays.  Additional proposals have been made 
                in the years since, including several innovative designs by Ralph 
                Merkle[2].  In recent years, there has been a great deal of attention 
                on carbon nanotubes, comprised of hexagonal arrays of carbon atoms 
                assembled in three dimensions, which are also capable of providing 
                both mechanical and electronic functions at the molecular level.  
                
 
 
 
-  The assembler's internal environment needs to prevent 
                environmental impurities from interfering with the delicate assembly 
                process.  Drexler's proposal is to maintain a near vacuum and 
                build the assembler walls out of the same diamondoid material 
                that the assembler itself is capable of making.  
 
 
 
-  The energy required for the assembly process can be 
                provided either through electricity or through chemical energy.  
                Drexler proposed a chemical process with the fuel interlaced with 
                the raw building material.  More recent proposals utilize nanoengineered 
                fuel cells incorporating hydrogen and oxygen or glucose and oxygen.
 
 
            Although many configurations have been proposed, the typical assembler 
            has been described as a tabletop unit that can manufacture any physically 
            possible product for  which we have a software description.  Products 
            can range from computers, clothes, and works of art to cooked meals.  
            Larger products, such as furniture, cars, or even houses, can be built 
            in a modular fashion, or using larger assemblers.  Of particular importance, 
            an assembler can create copies of itself.  The incremental cost of 
            creating any physical product, including the assemblers themselves, 
            would be pennies per pound, basically the cost of the raw materials.  
            The real cost, of course, would be the value of the information describing 
            each type of product, that is the software that controls the assembly 
            process.  Thus everything of value in the world, including physical 
            objects, would be comprised essentially of information.  We are not 
            that far from this situation today, since the "information content" 
            of products is rapidly asymptoting to 100 percent of their value.  
            In operation, the centralized data store sends out commands simultaneously 
              to all of the assembly robots.  There would be trillions of robots 
              in an assembler, each executing the same instruction at the same 
              time.  The assembler creates these molecular robots by starting 
              with a small number and then using these robots to create additional 
              ones in an iterative fashion, until the requisite number of robots 
              has been created.   
Each local robot has a local data storage that specifies the type 
              of mechanism it is building.  This local data storage is used to 
              mask the global instructions being sent from the centralized data 
              store so that certain instructions are blocked and local parameters 
              are filled in.  In this way, even though all of the assemblers are 
              receiving the same sequence of instructions, there is a level of 
              customization to the part being built by each molecular robot.  
              Each robot extracts the raw materials it needs, which includes individual 
              carbon atoms and molecular fragments, from the source material.  
              This source material also includes the requisite chemical fuel.  
              All of the requisite design requirements, including routing the 
              instructions and the source material, were described in detail in 
              Drexler's two classic works. 
Nature shows that molecules can serve as machines because living 
              things work by means of such machinery.  Enzymes are molecular machines 
              that make, break, and rearrange the bonds holding other molecules 
              together.  Muscles are driven by molecular machines that haul fibers 
              past one another.  DNA serves as a data-storage system, transmitting 
              digital instructions to molecular machines, the ribosomes, that 
              manufacture protein molecules.  And these protein molecules, in 
              turn, make up most of the molecular machinery. 
 -- Eric Drexler 
The ultimate existence proof of the feasibility of a molecular 
              assembler is life itself.  Indeed, as we deepen out understanding 
              of the information basis of life processes, we are discovering specific 
              ideas to address the design requirements of a generalized molecular 
              assembler.  For example, proposals have been made to use a molecular 
              energy source of glucose and ATP similar to that used by biological 
              cells.   
Consider how biology solves each of the design challenges of a 
              Drexler assembler.  The ribosome represents both the computer and 
              the construction robot.  Life does not use centralized data storage, 
              but provides the entire code to every cell.  The ability to restrict 
              the local data storage of a nanoengineered robot to only a small 
              part of the assembly code (using the "broadcast" architecture), 
              particularly when doing self-replication, is one critical way nanotechnology 
              can be engineered to be safer than biology.   
With the advent of full-scale nanotechnology in the 2020s, we will 
              have the potential to replace biology's genetic information repository 
              in the cell nucleus with a nanoengineered system that would maintain 
              the genetic code and simulate the actions of RNA, the ribosome, 
              and other elements of the computer in biology's assembler.  There 
              would be significant benefits in doing this.  We could eliminate 
              the accumulation of DNA transcription errors, one major source of 
              the aging process.  We could introduce DNA changes to essentially 
              reprogram our genes (something we'll be able to do long before this 
              scenario, using gene-therapy techniques).   
With such a nanoengineered system, the recommended broadcast architecture 
              could enable us to turn off unwanted replication, thereby defeating 
              cancer, autoimmune reactions, and other disease processes.  Although 
              most of these disease processes will have already been defeated 
              by genetic engineering, reengineering the computer of life using 
              nanotechnology could eliminate any remaining obstacles and create 
              a level of durability and flexibility that goes vastly beyond the 
              inherent capabilities of biology. 
Life's local data storage is, of course, the DNA strands, broken 
              into specific genes on the chromosomes.  The task of instruction-masking 
              (blocking genes that do not contribute to a particular cell type) 
              is controlled by the short RNA molecules and peptides that govern 
              gene expression.  The internal environment the ribosome is able 
              to function in is the particular chemical environment maintained 
              inside the cell, which includes a particular acid-alkaline equilibrium 
              (pH between 6.8 and 7.1 in human cells) and other chemical balances 
              needed for the delicate operations of the ribosome.  The cell wall 
              is responsible for protecting this internal cellular environment 
              from disturbance by the outside world.   
The robot arm tip would use the ribosome's ability to implement 
              enzymatic reactions to break off each amino acid, each bound to 
              a specific transfer RNA, and to connect it to its adjoining amino 
              acid using a peptide bond.   
However, the goal of molecular manufacturing is not merely to replicate 
              the molecular assembly capabilities of biology.  Biological systems 
              are limited to building systems from protein, which has profound 
              limitations in strength and speed.  Nanobots built from diamondoid 
              gears and rotors can be thousands of times faster and stronger than 
              biological cells.  The comparison is even more dramatic with regard 
              to computation: the switching speed of nanotube-based computation 
              would be millions of times faster than the extremely slow transaction 
              speed of the electrochemical switching used in mammalian interneuronal 
              connections (typically around 200 transactions per second, although 
              the nonlinear transactions that take place in the dendrites and 
              synapses are more complex than single computations).   
The concept of a diamondoid assembler described above uses a consistent 
              input material (for construction and fuel).  This is one of several 
              protections against molecule-scale replication of robots in an uncontrolled 
              fashion in the outside world.  Biology's replication robot, the 
              ribosome, also requires carefully controlled source and fuel materials, 
              which are provided by our digestive system.  As nano-based replicators 
              become more sophisticated, more capable of extracting carbon atoms 
              and carbon-based molecular fragments from less well-controlled source 
              materials, and able to operate outside of controlled replicator 
              enclosures such as in the biological world, they will have the potential 
              to present a grave threat to that world, particularly in view of 
              the vastly greater strength and speed of nano-based replicators 
              over any biological system.  This is, of course, the source of great 
              controversy, which is alluded to in the Drexler-Smalley debate article 
              and letters. 
In the decade since publication of Drexler's Nanosystems, 
              each aspect of Drexler's conceptual designs has been strengthened 
              through additional design proposals, supercomputer simulations, 
              and, most importantly, actual construction of molecular machines.  
              Boston College chemistry professor T. Ross Kelly reported in the 
              journal Nature that his construction of a chemically-powered 
              nanomotor was built from 78 atoms.[3]  
              A biomolecular research group headed by C. D. Montemagno created 
              an ATP-fueled nanomotor.[4]  
              Another molecule-sized motor fueled by solar energy was created 
              by Ben Feringa at the University of Groningen in the Netherlands 
              out of 58 atoms.[5]  Similar 
              progress has been made on other molecular-scale mechanical components 
              such as gears, rotors, and levers.  Systems demonstrating the use 
              of chemical energy and acoustic energy (as originally described 
              by Drexler) have been designed, simulated, and, in many cases, actually 
              constructed.  Substantial progress has been made in developing various 
              types of electronic components from molecule-scale devices, particularly 
              in the area of carbon nanotubes, an area that Smalley has pioneered.  
             
Fat and Sticky Fingers
In the wake of rapidly expanding development of each facet of future 
              nanotechnology systems, no serious flaw to Drexler's universal assembler 
              concept has been discovered or described.  Smalley's highly publicized 
              objection in Scientific American [6] 
              was based on a distorted description of the Drexler proposal; it 
              ignored the extensive body of work in the past decade.  As a pioneer 
              of carbon nanotubes, Smalley has gone back and forth between enthusiasm 
              and skepticism, having written that "nanotechnology holds the answer, 
              to the extent there are answers, to most of our pressing material 
              needs in energy, health, communication, transportation, food, water 
              …." 
Smalley describes Drexler's assembler as consisting of five to 
              ten "fingers" (manipulator arms) to hold, move, and place each atom 
              in the machine being constructed.  He then goes on to point out 
              that there isn't room for so many fingers in the cramped space that 
              a nanobot assembly robot has to work (which he calls the "fat fingers" 
              problem) and that these fingers would have difficulty letting go 
              of their atomic cargo because of molecular attraction forces (the 
              "sticky fingers" problem).  Smalley describes the "intricate three-dimensional 
              waltz that is carried out" by five to fifteen atoms in a typical 
              chemical reaction.  Drexler's proposal doesn't look anything like 
              the straw man description that Smalley criticizes.  Drexler's proposal, 
              and most of those that have followed, have a single probe, or "finger."  
             
Moreover, there have been extensive description and analyses of 
              viable tip chemistries that do not involve grasping and placing 
              atoms as if they were mechanical pieces to be deposited in place.  
              For example, the feasibility of moving hydrogen atoms using Drexler's 
              "propynyl hydrogen abstraction" tip[7] has been extensively confirmed in the intervening years.[8]  The ability of the scanning probe microscope (SPM), developed 
              at IBM in 1981, and the more sophisticated atomic force microscope 
              to place individual atoms through specific reactions of a tip with 
              a molecular-scale structure provide additional existence proofs.  
              Indeed, if Smalley's critique were valid, none of us would be here 
              to discuss it because life itself would be impossible.   
Smalley also objects that despite "working furiously  . . . generating 
              even a tiny amount of a product would take [a nanobot] … millions 
              of years."  Smalley is correct, of course, that an assembler with 
              only one nanobot wouldn't produce any appreciable quantities of 
              a product.  However, the basic concept of nanotechnology is that 
              we will need trillions of nanobots to accomplish meaningful results.  
              This is also the source of the safety concerns that have received 
              ample attention.  Creating trillions of nanobots at reasonable cost 
              will require the nanobots to make themselves.  This self-replication 
              solves the economic issue while introducing grave dangers.  Biology 
              used the same solution to create organisms with trillions of cells, 
              and indeed we find that virtually all diseases derive from biology's 
              self-replication process gone awry.   
Earlier challenges to the concepts underlying nanotechnology have 
              also been effectively addressed.  Critics pointed out that nanobots 
              would be subject to bombardment by thermal vibration of nuclei, 
              atoms, and molecules.  This is one reason conceptual designers of 
              nanotechnology have emphasized building structural components from 
              diamondoid or carbon nanotubes.  Increasing the strength or stiffness 
              of a system reduces its susceptibility to thermal effects.  Analysis 
              of these designs have shown them to be thousands of times more stable 
              in the presence of thermal effects than biological systems, so they 
              can operate in a far wider temperature range[9]. 
Similar challenges were made regarding positional uncertainty from 
              quantum effects, based on the extremely small feature size of nanoengineered 
              devices.    Quantum effects are significant for an electron, but 
              a single carbon atom nucleus is more than 20,000 times more massive 
              than an electron.  A nanobot will be constructed from hundreds of 
              thousands to millions of carbon and other atoms, so a nanobot will 
              be billions of times more massive than an electron.  Plugging this 
              ratio in the fundamental equation for quantum positional uncertainty 
              shows this to be an insignificant factor.   
Power has represented another challenge.  Drexler's original proposals 
              involved glucose-oxygen fuel cells, which have held up well in feasibility 
              studies.  An advantage of the glucose-oxygen approach is that nanomedicine 
              applications can harness the glucose, oxygen, and ATP resources 
              already provided by the human digestive system.  A nanoscale motor 
              was recently created using propellers made of nickel and powered 
              by an ATP-based enzyme.[10]   
However, recent progress in implementing MEMS-scale and even nanoscale 
              hydrogen-oxygen fuel cells have provided an alternative approach.  
              Hydrogen-oxygen fuel cells, with hydrogen provided by safe methanol 
              fuel, have made substantial progress in recent years.  A small company 
              in Massachusetts, Integrated Fuel Cell Technologies, Inc.[11] 
              has demonstrated a MEMS-based fuel cell.  Each postage-stamp- sized 
              device contains thousands of microscopic fuel cells and includes 
              the fuel lines and electronic controls.  NEC plans to introduce 
              fuel cells based on nanotubes in 2004 for notebook computers and 
              other portable electronics.  They claim their small power sources 
              will power devices for up to 40 hours before the user needs to change 
              the methanol canister.   
The Debate Heats Up
On April 16, 2003, Drexler responded to Smalley's Scientific American 
              article with an open 
              letter.  He cited 20 years of research by himself and others 
              and responded specifically to the fat and sticky fingers objection.  
              As I discussed above, molecular assemblers were never described 
              as having fingers at all, but rather precise positioning of reactive 
              molecules.  Drexler cited biological enzymes and ribosomes as examples 
              of precise molecular assembly in the natural world.  Drexler closes 
              by quoting Smalley's own observation that "when a scientist says 
              something is possible, they're probably underestimating how long 
              it will take.  But if they say it's impossible, they're probably 
              wrong." 
Three 
              more rounds of this debate were published today.  Smalley responds 
              to Drexler's open letter by backing off of his fat and sticky fingers 
              objection and acknowledging that enzymes and ribosomes do indeed 
              engage in the precise molecular assembly that Smalley had earlier 
              indicated was impossible. Smalley says biological enzymes only work 
              in water and that such water-based chemistry is limited to biological 
              structures such as "wood, flesh and bone." As Drexler has stated[12], 
              this is erroneous. Many enzymes, even those that ordinarily work 
              in water, can also function in anhydrous organic solvents and some 
              enzymes can operate on substrates in the vapor phase, with no liquid 
              at all. [13].  
Smalley goes on to state (without any derivation or citations) 
              that enzymatic-like reactions can only take place with biological 
              enzymes.  This is also erroneous. It is easy to see why biological 
              evolution adopted water-based chemistry.   Water is the most abundant 
              substance found on our planet.  It also comprises 70 to 90 percent 
              of our bodies, our food, and indeed of all organic matter.  Most 
              people think of water as fairly simple, but it is a far more complex 
              phenomenon than conventional wisdom suggests. 
As every grade school child knows, water is comprised of molecules, 
              each containing two atoms of hydrogen and one atom of oxygen, the 
              most commonly known chemical formula, H 2O.  However, consider some 
              of water's complications and their implications.  In a liquid state, 
              the two hydrogen atoms make a 104.5° angle with the oxygen atom, 
              which increases to 109.5° when water freezes.  This is why water 
              molecules are more spread out in the form of ice, providing it with 
              a lower density than liquid water.  This is why ice floats.   
Although the overall water molecule is electrically neutral, the 
              placement of the electrons creates polarization effects.  The side 
              with the hydrogen atoms is relatively positive in electrical charge, 
              whereas the oxygen side is slightly negative.  So water molecules 
              do not exist in isolation, rather they combine with one another 
              in small groups to assume, typically, pentagonal or hexagonal shapes[14].  These multi-molecule structures can change back and 
              forth between hexagonal and pentagonal configurations 100 billion 
              times a second.   At room temperature, only about 3 percent of the 
              clusters are hexagonal, but this increases to 100 percent as the 
              water gets colder.  This is why snowflakes are hexagonal.   
These three-dimensional electrical properties of water are quite 
              powerful and can break apart the strong chemical bonds of other 
              compounds.  Consider what happens when you put salt into water.  
              Salt is quite stable when dry, but is quickly torn apart into its 
              ionic components when placed in water.  The negatively charged oxygen 
              side of the water molecules attracts positively charged sodium ions 
              (Na+), while the positively charged hydrogen side of 
              the water molecules attracts the negatively charged chlorine ions 
              (Cl-).  In the dry form of salt, the sodium and chlorine 
              atoms are tightly bound together, but these bonds are easily broken 
              by the electrical charge of the water molecules.  Water is considered 
              "the universal solvent" and is involved in most of the biochemical 
              pathways in our bodies.  So we can regard the chemistry of life 
              on our planet primarily as water chemistry.   
However, the primary thrust of our technology has been to develop 
              systems that are not limited to the restrictions of biological evolution, 
              which exclusively adopted water-based chemistry and proteins as 
              its foundation.  Biological systems can fly, but if you want to 
              fly at 30,000 feet and at hundreds or thousands of miles per hour, 
              you would use our modern technology, not proteins.  Biological systems 
              such as human brains can remember things and do calculations, but 
              if you want to do data mining on billions of items of information, 
              you would want to use our electronic technology, not unassisted 
              human brains.   
Smalley is ignoring the past decade of research on alternative 
              means of positioning molecular fragments using precisely guided 
              molecular reactions.  Precisely controlled synthesis of diamondoid 
              (diamond-like material formed into precise patterns) has been extensively 
              studied, including the ability to remove a single hydrogen atom 
              from a hydrogenated diamond surface.[15]  Related research supporting the feasibility of hydrogen abstraction 
              and precisely-guided diamondoid synthesis has been conducted at 
              the Materials and Process Simulation Center at Caltech; the Department 
              of Materials Science and Engineering at North Carolina State University; 
              the Institute for Molecular Manufacturing, the University of Kentucky; 
              the United States Naval Academy, and the Xerox Palo Alto Research 
              Center.[16] 
Smalley is also ignoring the well-established scanning probe microscope 
              mentioned above, which uses precisely controlled molecular reactions.  
              Building on these concepts, Ralph Merkle has described tip reactions 
              that can involve up to four reactants.[17]  
              There is extensive literature on site-specific reactions that can 
              be precisely guided and that would be feasible for the tip chemistry 
              in a molecular assembler.[18]  
              Smalley ignores this body of literature when he maintains that only 
              biological enzymes in water can perform this type of reaction.  
              Recently, many tools that go beyond SPMs are emerging that can reliably 
              manipulate atoms and molecular fragments.   
On September 3, 2003, Drexler responded 
              to Smalley's 
              response by alluding once again to the extensive body of literature 
              that Smalley ignores.  He cites the analogy to a modern factory, 
              only at a nano-scale.  He cites analyses of transition state theory 
              indicating that positional control would be feasible at megahertz 
              frequencies for appropriately selected reactants.   
The latest installment of this debate is a follow-up 
              letter by Smalley.  This letter is short on specifics and 
              science and long on imprecise metaphors that avoid the key issues.  
              He writes, for example, that "much like you can't make a boy and 
              a girl fall in love with each other simply by pushing them together, 
              you cannot make precise chemistry occur as desired between two molecular 
              objects with simple mechanical motion…cannot be done simply by mushing 
              two molecular objects together."  He again acknowledges that enzymes 
              do in fact accomplish this, but refuses to acknowledge that such 
              reactions could take place outside of a biological-like system: 
              "this is why I led you…..to talk about real chemistry with real 
              enzymes….any such system will need a liquid medium.  For the enzymes 
              we know about, that liquid will have to be water, and the types 
              of things that can be synthesized with water around cannot be much 
              broader than meat and bone of biology." 
I can understand Drexler's frustration in this debate because I 
              have had many critics that do not bother to read or understand the 
              data and arguments that I have presented for my own conceptions 
              of future technologies.  Smalley's argument is of the form that 
              "we don't have 'X' today, therefore 'X' is impossible."  I encounter 
              this class of argument repeatedly in the area of artificial intelligence.  
              Critics will cite the limitations of today's systems as proof that 
              such limitations are inherent and can never be overcome.  These 
              critics ignore the extensive list of contemporary examples of AI 
              (for example, airplanes and weapons that fly and guide themselves, 
              automated diagnosis of electrocardiograms and blood cell images, 
              automated detection of credit card fraud, automated investment programs 
              that routinely outperform human analysts, telephone-based natural 
              language response systems, and hundreds of others) that represent 
              working systems that are commercially available today that were 
              only research programs a decade ago.   
Those of us who attempt to project into the future based on well-grounded 
              methodologies are at a disadvantage.  Certain future realities may 
              be inevitable, but they are not yet manifest, so they are easy to 
              deny.  There was a small body of thought at the beginning of the 
              20th century that heavier-than-air flight was feasible, 
              but mainstream skeptics could simply point out that if it was so 
              feasible, why had it never been demonstrated?  In 1990, Kasparov 
              scoffed at the idea that machine chess players could ever possibly 
              defeat him.  When it happened in 1997, observers were quick to dismiss 
              the achievement by dismissing the importance of chess.   
Smalley reveals at least part of his motives at the end of his 
              most recent letter when he writes:  
"A few weeks ago I gave a talk on nanotechnology and energy titled 
              'Be a Scientist, Save the World' to about 700 middle and high school 
              students in the Spring Branch ISD, a large public school system 
              here in the Houston area.    Leading up to my visit the students 
              were asked to 'write an essay on 'why I am a Nanogeek.  Hundreds 
              responded, and I had the privilege of reading the top 30 essays, 
              picking my favorite top 5. Of the essays I read, nearly half assumed 
              that self-replicating nanobots were possible, and most were deeply 
              worried about what would happen in their future as these nanobots 
              spread around the world.    I did what I could to allay their fears, 
              but there is no question that many of these youngsters have been 
              told a bedtime story that is deeply troubling. You and people around 
              you have scared our children." 
I would point out to Smalley that earlier critics also expressed 
              skepticism that either world-wide communication networks or software 
              viruses that would spread across them were feasible.  Today, we 
              have both the benefits and the damage from both of these capabilities.  
              However, along with the danger of software viruses has also emerged 
              a technological immune system.  While it does not completely protect 
              us, few people would advocate eliminating the Internet in order 
              to eliminate software viruses.  We are obtaining far more benefit 
              than damage from this latest example of intertwined promise and 
              peril.   
Smalley's approach to reassuring the public about the potential 
              abuse of this future technology is not the right strategy.  Denying 
              the feasibility of both the promise and the peril of molecular assembly 
              will ultimately backfire and fail to guide research in the needed 
              constructive direction.  By the 2020s, molecular assembly will provide 
              tools to effectively combat poverty, clean up our environment, overcome 
              disease, extend human longevity, and many other worthwhile pursuits.  
Like every other technology that humankind has created, it can 
              also be used to amplify and enable our destructive side.  It is 
              important that we approach this technology in a knowledgeable manner 
              to gain the profound benefits it promises, while avoiding its dangers.  
              Drexler and his colleagues at the Foresight Institute have been 
              in the forefront of developing the ethical guidelines and design 
              considerations needed to guide the technology in a safe and constructive 
              direction.   
Denying the feasibility of an impending technological transformation 
              is a short-sighted strategy.   
Notes
[1] Chemical 
              & Engineering News, December 1, 2003 
[2] Ralph C. Merkle, "A proposed 
              'metabolism' for a hydrocarbon assembler," Nanotechnology
8 (1997): 149-162; http://www.zyvex.com/nanotech/hydroCarbonMetabolism.html. 
             
[3] T.R. Kelly, H. De Silva, 
              R.A. Silva, "Unidirectional rotary motion in a molecular system," 
              Nature 401 (September 9, 1999): 150-152. 
[4] C.D. Montemagno, G.D. 
              Bachan, "Constructing nanomechanical devices powered by biomolecular 
              motors," Nanotechnology 10 (1999): 225-231; G. D. 
              Bachand, C.D. Montemagno, "Constructing organic / inorganic NEMS 
              devices powered by biomolecular motors," Biomedical Microdevices 
              2 (2000): 179-184. 
[5] N. Koumura, R.W. Zijlstra, 
              R.A. van Delden, N. Harada, B.L. Feringa, "Light-driven monodirectional 
              molecular rotor," Nature 401 (September 9, 1999): 
              152-155. 
[6] Richard E. Smalley, "Of 
              chemistry, love, and nanobots," Scientific American 285 
              (September, 2001): 76-77.  http://smalley.rice.edu/rick's%20publications/SA285-76.pdf. 
[7] Nanosystems: molecular 
              machinery, manufacturing, and computation, by K. Eric Drexler, 
              Wiley 1992. 
[8] See for example, Theoretical 
              Studies of a Hydrogen Abstraction Tool for Nanotechnology, by 
              Charles B. Musgrave, Jason K. Perry, Ralph C. Merkle, and William 
              A. Goddard III, Nanotechnology 2, 1991 pages 187-195. 
[9] See equation and explanation 
              on page 3 of "That's Impossible!" How good scientists reach bad 
              conclusions by Ralph C. Merkle, http://www.zyvex.com/nanotech/impossible.html.  
             
[10] Montemagno, C., and 
              Bachand G.  1999 Nanotechnology 10 225. 
[11] By way of disclosure, 
              the author is an advisor and investor in this company. 
[12]  Chemical 
              & Engineering News, December 1, 2003 
[13] A. Zaks and A.M. Klibanov 
              in Science (1984, 224:1249-51) 
[14] "The apparent simplicity 
              of the water molecule belies the enormous complexity of its interactions 
              with other molecules, including other water molecules" (A. Soper. 
              2002. "Water and ice." Science 297: 1288-1289). There is 
              much that is still up for debate, as shown by the numerous articles 
              still being published about this most basic of molecules, H20. For 
              example, D. Klug. 2001. "Glassy water." Science 294:2305-2306; 
              P. Geissler et al., 2001. "Autoionization in liquid water." Science 
              291(5511):2121-2124; J.K. Gregory et al. 1997. "The water dipole 
              moment in water clusters." Science 275:814-817; and K. Liu 
              et al. 1996. "Water clusters." Science 271:929-933;  
A water molecule has slightly negative and slightly positive ends, 
              which means water molecules interact with other water molecules 
              to form networks. The partially positive hydrogen atom on one molecule 
              is attracted to the partially negative oxygen on a neighboring molecule 
              (hydrogen bonding). Three-dimensional hexamers involving 6 molecules 
              are thought to be particularly stable, though none of these clusters 
              lasts longer than a few picoseconds. 
The polarity of water results in a number of anomalous properties. 
              One of the best known is that the solid phase (ice) is less dense 
              than the liquid phase. This is because the volume of water varies 
              with the temperature, and the volume increases by about 9% on freezing. 
              Due to hydrogen bonding, water also has a higher-than-expected boiling 
              point.  
[15] http://www.foresight.org/SciAmDebate/SciAmResponse.html, 
              http://www.imm.org/SciAmDebate2/smalley.html, 
              http://www.rfreitas.com/Nano/DimerTool.htm. 
             
[16] The analysis of the 
              hydrogen abstraction tool has involved many people, including: Donald 
              W. Brenner, Richard J. Colton, K. Eric Drexler, William A. Goddard, 
              III, J. A. Harrison, Jason K. Perry, Ralph C. Merkle, Charles B. 
              Musgrave, O. A. Shenderova, Susan B. Sinnott, and Carter T. White. 
             
[17] Ralph C. Merkle, "A 
              proposed 'metabolism' for a hydrocarbon assembler," Nanotechnology
8(1997):149-162; http://www.zyvex.com/nanotech/hydroCarbonMetabolism.html 
[18] Wilson Ho, Hyojune 
              Lee, "Single bond formation and characterization with a scanning 
              tunneling microscope," Science 286(26 November 
              1999):1719-1722; http://www.physics.uci.edu/~wilsonho/stm-iets.html. 
             
K. Eric Drexler, Nanosystems: Molecular Machinery, Manufacturing, 
              and Computation, John Wiley & Sons, New York, 1992, Chapter 
              8. 
Ralph C. Merkle, "A proposed 'metabolism' for a hydrocarbon 
              assembler," Nanotechnology 8(1997):149-162; http://www.zyvex.com/nanotech/hydroCarbonMetabolism.html. 
             
Charles B. Musgrave, Jason K. Perry, Ralph C. Merkle, William A. 
              Goddard III, "Theoretical studies of a hydrogen abstraction 
              tool for nanotechnology," Nanotechnology 2(1991):187-195; 
              http://www.zyvex.com/nanotech/Habs/Habs.html. 
Michael Page, Donald W. Brenner, "Hydrogen abstraction from 
              a diamond surface: Ab initio quantum chemical study using 
              constrained isobutane as a model," J. Am. Chem. Soc.
113(1991):3270-3274. 
Susan B. Sinnott, Richard J. Colton, Carter T. White, Donald W. 
              Brenner, "Surface patterning by atomically-controlled chemical 
              forces: molecular dynamics simulations," Surf. Sci.
316(1994):L1055-L1060. 
D.W. Brenner, S.B. Sinnott, J.A. Harrison, O.A. Shenderova, "Simulated 
              engineering of nanostructures," Nanotechnology 7(1996):161-167; 
              http://www.zyvex.com/nanotech/nano4/brennerPaper.pdf 
S.P. Walch, W.A. Goddard III, R.C. Merkle, "Theoretical studies 
              of reactions on diamond surfaces," Fifth Foresight Conference 
              on Molecular Nanotechnology, 1997; http://www.foresight.org/Conferences/MNT05/Abstracts/Walcabst.html. 
             
Stephen P. Walch, Ralph C. Merkle, "Theoretical studies of 
              diamond mechanosynthesis reactions," Nanotechnology
9(1998):285-296. 
Fedor N. Dzegilenko, Deepak Srivastava, Subhash Saini, "Simulations 
              of carbon nanotube tip assisted mechano-chemical reactions on a 
              diamond surface," Nanotechnology 9(December 1998):325-330. 
J.W. Lyding, K. Hess, G.C. Abeln, D.S. Thompson, J.S. Moore, M.C. 
              Hersam, E.T. Foley, J. Lee, Z. Chen, S.T. Hwang, H. Choi, P.H. Avouris, 
              I.C. Kizilyalli, "UHV-STM nanofabrication and hydrogen/deuterium 
              desorption from silicon surfaces: implications for CMOS technology," 
              Appl. Surf. Sci. 130(1998):221-230. 
E.T. Foley, A.F. Kam, J.W. Lyding, P.H. Avouris, P. H. (1998), 
              "Cryogenic UHV-STM study of hydrogen and deuterium desorption 
              from Si(100)," Phys. Rev. Lett. 80(1998):1336-1339. 
M.C. Hersam, G.C. Abeln, J.W. Lyding, "An approach for efficiently 
              locating and electrically contacting nanostructures fabricated via 
              UHV-STM lithography on Si(100)," Microelectronic Engineering
47(1999):235-. 
L.J. Lauhon, W. Ho, "Inducing and observing the abstraction 
              of a single hydrogen atom in bimolecular reaction with a scanning 
              tunneling microscope," J. Phys. Chem. 105(2000):3987-3992. 
Ralph C. Merkle, Robert A. Freitas Jr., “Theoretical analysis 
              of a carbon-carbon dimer placement tool for diamond mechanosynthesis,” 
              J. Nanosci. Nanotechnol. 3(August 2003):319-324. http://www.rfreitas.com/Nano/JNNDimerTool.pdf 
 
              Jingping Peng, Robert A. Freitas Jr., Ralph C. Merkle, “Theoretical 
              Analysis of Diamond Mechanosynthesis. Part I. Stability of C2 Mediated 
              Growth of Nanocrystalline Diamond C(110) Surface,” J. Comp. 
              Theor. Nanosci. 1(March 2004). In press.  
 
              David J. Mann, Jingping Peng, Robert A. Freitas Jr., Ralph C. Merkle, 
              “Theoretical Analysis of Diamond Mechanosynthesis. Part II. 
              C2 Mediated Growth of Diamond C(110) Surface via Si/Ge-Triadamantane 
              Dimer Placement Tools,” J. Comp. Theor. Nanosci. 1(March 2004). 
              In press.  
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